| IATA | ICAO | Airport name | City | Delays |
|---|---|---|---|---|
| GEB | - | Gebe Airport | Gebe | |
| AKQ | - | Gunung Batin Airport | Astraksetra | |
| ILA | - | Illaga Airport | Illaga | |
| IUL | - | Ilu Airport | Ilu | |
| INX | - | Inanwatan Airport | Inanwatan | |
| - | WIAR | Iswahyudi | Madiun | |
| RGT | WIPR | Japura Airport | Rengat | |
| KBX | - | Kambuaya Airport | Kambuaya | |
| KCD | - | Kamur Airport | Kamur | |
| KBF | - | Karubaga Airport | Karubaga | |
| KEQ | - | Kebar Airport | Kebar | |
| KEA | - | Keisah Airport | Keisah | |
| LLN | - | Kelila Airport | Kelila | |
| KLQ | - | Keluang Airport | Keluang | |
| KEI | - | Kepi Airport | Kepi | |
| KRC | - | Kerinci Airport | Kerinci | |
| KJT | - | Kertajati International Airport | Majalengka | |
| KMM | - | Kiman Airport | Kiman | |
| - | WAPQ | Kisar | Kisar Island | |
| KOX | - | Kokonao Airport | Kokonao | |
| KCI | - | Kon Airport | Kon | |
| FOO | WABF | Kornasoren Airfield | Noemfoor | |
| KOD | - | Kotabangun Airport | Kotabangun | |
| - | WITG | Lasikin Airport | Sinabang | |
| LHI | - | Lereh Airport | Lereh | |
| LMU | - | Letung Airport | Jemaja Island | |
| LSX | - | Lhok Sukon Airport | Lhok Sukon | |
| LBW | WALB | Long Bawan Airport | Long Bawan | |
| LYK | - | Lunyuk Airport | Lunyuk | |
| MPT | - | Maliana Airport | Maliana | |
| MAL | - | Mangole Airport | Mangole | |
| MJY | - | Mangunjaya Airport | Mangunjaya | |
| MSI | - | Masalembo Airport | Masalembo | |
| RDE | - | Merdey Airport | Merdey | |
| MDP | - | Mindiptana Airport | Mindiptana | |
| ONI | - | Moanamani Airport | Moanamani | |
| BJG | - | Mopait Airport | Kota Mobagu | |
| MPC | - | Muko-Muko Airport | Muko-Muko | |
| LII | - | Mulia Airport | Mulia | |
| MUF | - | Muting Airport | Muting | |
| NPO | - | Nangapinoh Airport | Nangapinoh | |
| OBD | - | Obano Airport | Obano | |
| OEC | - | Ocussi Airport | Ocussi | |
| OKQ | - | Okaba Airport | Okaba | |
| PDO | - | Pendopo Airport | Pendopo | |
| CBN | - | Penggung Airport | Cirebon | |
| PCB | - | Pondok Cabe Airport | Pondok Cabe | |
| PPJ | - | Pulau Panjang Airport | Pulau Panjang | |
| PWL | - | Purwokerto Airport | Purwokerto | |
| - | WION | Ranai | Ranai |